Same functionality as before, now with file saving capabilities for diagnostics.
Usage
MCMC_diag(
results,
params = c("trace", "gelman", "corr", "ess", "acf", "quantiles", "acceptance"),
thin = 1,
save = FALSE,
output_dir = "mcmc_diagnostics",
file_prefix = "mcmc",
plot_width = 7,
plot_height = 5
)Arguments
- results
MCMC result object.
- params
Diagnostics to compute.
- thin
Thinning interval.
- save
Logical; whether to save output (default: FALSE).
- output_dir
Directory to save outputs (default: "mcmc_diagnostics").
- file_prefix
Optional prefix for filenames.
- plot_width
Width of plots in inches (default: 7).
- plot_height
Height of plots in inches (default: 5).