All functions

adding_data_extern()

Add External Data to a Repository with Validation

augment_withProportion_modif()

Add Aggregated Numerator and Denominator Columns Based on Selected Variables

augment_with_taxonomy()

Augment Dataset with Species-Complex Taxonomic Harmonization

Bionomics_For_Anophles_Model()

Estimate Species-Specific Bionomic Traits for Anopheles Using a Hierarchical Bayesian Model

create_datareq()

Filter and Prepare Dataset for Proportion-Based Analysis

create_repo()

Create and Load the Combined Repository Dataset

creation_df()

Prepare Clean and Taxonomically Harmonized Dataset for Bayesian Modeling

filter_bz_studies()

Filter Studies Based on Barnabas Zogo Criteria

launch_density_app()

Launch Interactive Density Explorer for Stan Model

obs_complex_species_pie()

Generate a Pie Chart of Observations by Species or Complex

obs_region_pie()

Generate a Pie Chart of Observations by Region

plot_density()

Generate Posterior Density Plots by Species Complex

prepare_data_density()

Format MCMC Samples for Visualization

prepare_stan_data()

Format Species-Level Data for Hierarchical Stan Model

read_data_file()

Read a CSV File from the Package's Internal Data Directory

region_period_filter()

Filter Dataset by Geographic Region and Time Period

required_cols()

Ensure Required Columns Are Present in a Data Frame

run_stan()

Run Hierarchical Bayesian Model with rstan

set_var_params()

Set Parameters and Transform Data for a Given Variable

species_complex_result()

Extract Summary Statistics from Stan Model Results